STRuster

 STRuster results: 81456

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Transmembrane helix hairpin
Superfamily: Cytochrome c oxidase subunit II-like, transmembrane region
Family: Cytochrome c oxidase subunit II-like, transmembrane region
Protein: Bacterial aa3 type cytochrome c oxidase subunit II
Species: Paracoccus denitrificans
Species SCOP sunid: 81456

 Set description
Number of entries: 2
SCOP Entries: d1qleb2 d1ar1b2
Alignment File: 81456.alig
Aligned Sequences: 81456_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 81456_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (51, 78), (95, 106)]
Uniprot Nr [(30, 32), (81, 108), (125, 136)]

 Invariant Regions
Region1
Alignment Nr[(3, 50), (79, 94)]
Uniprot Nr[(33, 80), (109, 124)]
Superposition81456_superp_1.pdb.gz
Rasmol Script81456_superp_1.rsm
View in Jmol