STRuster

 STRuster results: 81428

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Single transmembrane helix
Superfamily: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Family: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Protein: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Species: Cow (Bos taurus)
Species SCOP sunid: 81428

 Set description
Number of entries: 10
SCOP Entries: d2occz_ d1ocrm_ d2occm_ d1ocom_ d1ocrz_ d1oczm_ d1ocoz_ d1occz_ d1oczz_ d1occm_
Alignment File: 81428.alig
Aligned Sequences: 81428_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81428_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(40, 42)]
Uniprot Nr [(65, 67)]

 Invariant Regions
Region1
Alignment Nr[(0, 39)]
Uniprot Nr[(25, 64)]
Superposition81428_superp_1.pdb.gz
Rasmol Script81428_superp_1.rsm
View in Jmol