STRuster

 STRuster results: 81424

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Single transmembrane helix
Superfamily: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Family: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Protein: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Species: Cow (Bos taurus)
Species SCOP sunid: 81424

 Set description
Number of entries: 10
SCOP Entries: d2occy_ d2occl_ d1occl_ d1ocry_ d1ocrl_ d1occy_ d1ocol_ d1oczy_ d1ocoy_ d1oczl_
Alignment File: 81424.alig
Aligned Sequences: 81424_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81424_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (45, 46)]
Uniprot Nr [(17, 18), (62, 63)]

 Invariant Regions
Region1
Alignment Nr[(2, 44)]
Uniprot Nr[(19, 61)]
Superposition81424_superp_1.pdb.gz
Rasmol Script81424_superp_1.rsm
View in Jmol