STRuster

 STRuster results: 81416

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Single transmembrane helix
Superfamily: Mitochondrial cytochrome c oxidase subunit VIIa
Family: Mitochondrial cytochrome c oxidase subunit VIIa
Protein: Mitochondrial cytochrome c oxidase subunit VIIa
Species: Cow (Bos taurus)
Species SCOP sunid: 81416

 Set description
Number of entries: 10
SCOP Entries: d1occw_ d1oczw_ d1occj_ d1ocrw_ d1ocoj_ d1ocrj_ d2occw_ d2occj_ d1ocow_ d1oczj_
Alignment File: 81416.alig
Aligned Sequences: 81416_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81416_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1)]
Uniprot Nr [(22, 23)]

 Invariant Regions
Region1
Alignment Nr[(2, 57)]
Uniprot Nr[(24, 79)]
Superposition81416_superp_1.pdb.gz
Rasmol Script81416_superp_1.rsm
View in Jmol