STRuster

 STRuster results: 81371

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Heme-binding four-helical bundle
Superfamily: Fumarate reductase respiratory complex transmembrane subunits
Family: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
Protein: Fumarate reductase subunit FrdD
Species: Escherichia coli
Species SCOP sunid: 81371

 Set description
Number of entries: 6
SCOP Entries: d1kf6p_ d1kfyp_ d1l0vd_ d1kfyd_ d1kf6d_ d1l0vp_
Alignment File: 81371.alig
Aligned Sequences: 81371_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81371_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (37, 56)]
Uniprot Nr [(1, 7), (38, 57)]

 Invariant Regions
Region1
Alignment Nr[(7, 36), (57, 118)]
Uniprot Nr[(8, 37), (58, 119)]
Superposition81371_superp_1.pdb.gz
Rasmol Script81371_superp_1.rsm
View in Jmol