STRuster

 STRuster results: 75497

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Matrix metalloproteases, catalytic domain
Protein: Gelatinase B (MMP-9)
Species: Human (Homo sapiens)
Species SCOP sunid: 75497

 Set description
Number of entries: 5
SCOP Entries: d1gkdb_ d1l6ja2 d1gkca_ d1gkcb_ d1gkda_
Alignment File: 75497.alig
Aligned Sequences: 75497_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 75497_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 7), (106, 109)]
Uniprot Nr [(106, 113), (212, 215)]

 Invariant Regions
Region1
Alignment Nr[(8, 105), (110, 344)]
Uniprot Nr[(114, 211), (215, 444)]
Superposition75497_superp_1.pdb.gz
Rasmol Script75497_superp_1.rsm
View in Jmol