| STRuster results: 75494 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | Origin of replication-binding domain, RBD-like |
| Superfamily: | Origin of replication-binding domain, RBD-like |
| Family: | Replication protein Rep, nuclease domain |
| Protein: | Replication protein Rep, nuclease domain |
| Species: | Adeno-associated virus, aav-5 |
| Species SCOP sunid: | 75494 |
| Set description |
| Number of entries: | 9 |
| SCOP Entries: | d1rz9a_ d1rz9b_ d1m55b_ d1rz9d_ d1uuta_ d1rz9e_ d1m55a_ d1uutb_ d1rz9c_ |
| Alignment File: | 75494.alig |
| Aligned Sequences: | 75494_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 75494_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 31), (82, 86), (137, 139), (187, 194)] |
| Uniprot Nr | [(1, 32), (83, 87), (138, 140), (188, 195)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(32, 81), (87, 136), (140, 186)] |
| Uniprot Nr | [(33, 82), (88, 137), (141, 187)] |
| Superposition | 75494_superp_1.pdb.gz |
| Rasmol Script | 75494_superp_1.rsm |
| View in Jmol | |
