STRuster

 STRuster results: 75340

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines
Protein: Macrophage inflammatory protein, MIP
Species: Human (Homo sapiens), ccl20/mip-3a
Species SCOP sunid: 75340

 Set description
Number of entries: 2
SCOP Entries: d1m8ab_ d1m8aa_
Alignment File: 75340.alig
Aligned Sequences: 75340_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 75340_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 9), (24, 25)]
Uniprot Nr [(31, 40), (55, 56)]

 Invariant Regions
Region1
Alignment Nr[(10, 23), (26, 60)]
Uniprot Nr[(41, 54), (57, 91)]
Superposition75340_superp_1.pdb.gz
Rasmol Script75340_superp_1.rsm
View in Jmol