STRuster

 STRuster results: 75052

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Ribulose-phoshate binding barrel
Family: Tryptophan biosynthesis enzymes
Protein: Indole-3-glycerophosphate synthase, IPGS
Species: Thermotoga maritima
Species SCOP sunid: 75052

 Set description
Number of entries: 3
SCOP Entries: d1i4na_ d1j5ta_ d1i4nb_
Alignment File: 75052.alig
Aligned Sequences: 75052_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 75052_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(17, 27), (47, 70), (130, 131), (177, 188), (200, 209), (230, 235)]
Uniprot Nr [(19, 29), (49, 72), (132, 133), (179, 190), (202, 211), (232, 237)]

 Invariant Regions
Region1
Alignment Nr[(0, 16), (28, 46), (71, 129), (132, 176), (189, 199), (210, 229)]
Uniprot Nr[(2, 18), (30, 48), (73, 131), (134, 178), (191, 201), (212, 231)]
Superposition75052_superp_1.pdb.gz
Rasmol Script75052_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 16), (28, 46), (71, 129), (132, 176), (210, 229), (236, 250)]
Uniprot Nr[(2, 18), (30, 48), (73, 131), (134, 178), (212, 231), (238, 252)]
Superposition75052_superp_2.pdb.gz
Rasmol Script75052_superp_2.rsm
View in Jmol