STRuster

 STRuster results: 74870

 SCOP 1.71 classification
Class: All beta proteins
Fold: Cupredoxin-like
Superfamily: Cupredoxins
Family: Periplasmic domain of cytochrome c oxidase subunit II
Protein: Cytochrome c oxidase
Species: Rhodobacter sphaeroides
Species SCOP sunid: 74870

 Set description
Number of entries: 4
SCOP Entries: d1m57b1 d1m56h1 d1m56b1 d1m57h1
Alignment File: 74870.alig
Aligned Sequences: 74870_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 74870_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(57, 58), (148, 159)]
Uniprot Nr [(187, 188), (278, 289)]

 Invariant Regions
Region1
Alignment Nr[(0, 56), (59, 147)]
Uniprot Nr[(130, 186), (189, 277)]
Superposition74870_superp_1.pdb.gz
Rasmol Script74870_superp_1.rsm
View in Jmol