STRuster

 STRuster results: 74740

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Cyclin-like
Superfamily: Cyclin-like
Family: Cyclin
Protein: CDK5 activator 1 (NCK5a, p25)
Species: Human (Homo sapiens)
Species SCOP sunid: 74740

 Set description
Number of entries: 8
SCOP Entries: d1unhd_ d1unge_ d1unld_ d1h4le_ d1ungd_ d1unhe_ d1unle_ d1h4ld_
Alignment File: 74740.alig
Aligned Sequences: 74740_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 74740_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 12), (25, 44), (64, 72), (142, 148)]
Uniprot Nr [(145, 157), (170, 189), (209, 217), (287, 293)]

 Invariant Regions
Region1
Alignment Nr[(45, 63), (73, 141)]
Uniprot Nr[(190, 208), (218, 286)]
Superposition74740_superp_1.pdb.gz
Rasmol Script74740_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(13, 24)]
Uniprot Nr[(158, 169)]
Superposition74740_superp_2.pdb.gz
Rasmol Script74740_superp_2.rsm
View in Jmol