STRuster

 STRuster results: 74687

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Plant O-methyltransferase, N-terminal domain
Protein: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Species: Alfalfa (Medicago sativa)
Species SCOP sunid: 74687

 Set description
Number of entries: 6
SCOP Entries: d1kyzc1 d1kywa1 d1kyza1 d1kywf1 d1kywc1 d1kyze1
Alignment File: 74687.alig
Aligned Sequences: 74687_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 74687_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 12), (105, 114)]
Uniprot Nr [(5, 17), (110, 119)]

 Invariant Regions
Region1
Alignment Nr[(13, 104)]
Uniprot Nr[(18, 109)]
Superposition74687_superp_1.pdb.gz
Rasmol Script74687_superp_1.rsm
View in Jmol