STRuster

 STRuster results: 69906

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: NSP3 homodimer
Superfamily: NSP3 homodimer
Family: NSP3 homodimer
Protein: NSP3 homodimer
Species: Simian 11 rotavirus
Species SCOP sunid: 69906

 Set description
Number of entries: 8
SCOP Entries: d1knzb_ d1knzd_ d1knzi_ d1knza_ d1knzn_ d1knzc_ d1knzj_ d1knzm_
Alignment File: 69906.alig
Aligned Sequences: 69906_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 69906_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(46, 46), (61, 67), (87, 123), (135, 161)]
Uniprot Nr [(48, 48), (63, 69), (89, 125), (137, 163)]

 Invariant Regions
Region1
Alignment Nr[(0, 45), (47, 60), (68, 86)]
Uniprot Nr[(3, 47), (49, 62), (70, 88)]
Superposition69906_superp_1.pdb.gz
Rasmol Script69906_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(124, 134)]
Uniprot Nr[(126, 136)]
Superposition69906_superp_2.pdb.gz
Rasmol Script69906_superp_2.rsm
View in Jmol