| STRuster results: 69817 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | Phospholipase D/nuclease |
| Superfamily: | Phospholipase D/nuclease |
| Family: | Tyrosyl-DNA phosphodiesterase TDP1 |
| Protein: | Tyrosyl-DNA phosphodiesterase TDP1 |
| Species: | Human (Homo sapiens) |
| Species SCOP sunid: | 69817 |
| Set description |
| Number of entries: | 46 |
| SCOP Entries: | d1rg2b2 d1rg2b1 d1rffb1 d1rffb2 d1rgta2 d1nopb2 d1rgua1 d1rgtb1 d1qzqb1 d1qzqb2 d1mu7a2 d1mu7a1 d1rh0a1 d1rh0a2 d1rg1b1 d1jy1a1 d1rfia1 d1jy1a2 d1mu7b2 d1mu7b1 d1rfia2 d1rh0b2 d1rffa2 d1nopa1 d1nopa2 d1rgub1 d1rgub2 d1rg1a2 d1rfib2 d1rfib1 d1mu9b1 d1mu9b2 d1rgta1 d1nopb1 d1rg1b2 d1rgua2 d1qzqa1 d1qzqa2 d1rgtb2 d1rh0b1 d1mu9a1 d1rg1a1 d1rg2a2 d1rg2a1 d1mu9a2 d1rffa1 |
| Alignment File: | 69817.alig |
| Aligned Sequences: | 69817_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 69817_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(16, 17), (246, 247), (285, 286), (420, 429)] |
| Uniprot Nr | [(160, 161), (388, 389), (426, 427), (558, 567)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 15), (18, 245), (248, 284), (287, 419), (430, 471)] |
| Uniprot Nr | [(145, 159), (162, 387), (390, 425), (428, 557), (568, 608)] |
| Superposition | - |
