STRuster

 STRuster results: 69590

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Ribokinase-like
Superfamily: Ribokinase-like
Family: Thiamin biosynthesis kinases
Protein: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
Species: Salmonella typhimurium
Species SCOP sunid: 69590

 Set description
Number of entries: 4
SCOP Entries: d1jxhb_ d1jxia_ d1jxha_ d1jxib_
Alignment File: 69590.alig
Aligned Sequences: 69590_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 69590_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(110, 116)]
Uniprot Nr [(111, 117)]

 Invariant Regions
Region1
Alignment Nr[(0, 109), (117, 265)]
Uniprot Nr[(1, 110), (118, 266)]
Superposition69590_superp_1.pdb.gz
Rasmol Script69590_superp_1.rsm
View in Jmol