STRuster

 STRuster results: 69335

 SCOP 1.71 classification
Class: All beta proteins
Fold: Single-stranded right-handed beta-helix
Superfamily: Pectin lyase-like
Family: iota-carrageenase
Protein: iota-carrageenase
Species: Alteromonas sp., atcc 43554
Species SCOP sunid: 69335

 Set description
Number of entries: 4
SCOP Entries: d1h80b_ d1h80a_ d1ktwb_ d1ktwa_
Alignment File: 69335.alig
Aligned Sequences: 69335_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 69335_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(282, 284), (311, 312), (323, 324)]
Uniprot Nr [(310, 312), (339, 340), (351, 352)]

 Invariant Regions
Region1
Alignment Nr[(0, 281), (325, 463)]
Uniprot Nr[(28, 309), (353, 491)]
Superposition69335_superp_1.pdb.gz
Rasmol Script69335_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(285, 310), (313, 322)]
Uniprot Nr[(313, 338), (341, 350)]
Superposition69335_superp_2.pdb.gz
Rasmol Script69335_superp_2.rsm
View in Jmol