STRuster

 STRuster results: 69053

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Retroviral matrix proteins
Superfamily: Retroviral matrix proteins
Family: EIAV matrix antigen
Protein: EIAV matrix antigen
Species: Equine infectious anemia virus, EIAV
Species SCOP sunid: 69053

 Set description
Number of entries: 2
SCOP Entries: d1hekb_ d1heka_
Alignment File: 69053.alig
Aligned Sequences: 69053_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 69053_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 29), (41, 55), (73, 80), (98, 116)]
Uniprot Nr [(0, 23), (35, 49), (67, 74), (91, 109)]

 Invariant Regions
Region1
Alignment Nr[(30, 40), (56, 72), (81, 97)]
Uniprot Nr[(24, 34), (50, 66), (75, 90)]
Superposition69053_superp_1.pdb.gz
Rasmol Script69053_superp_1.rsm
View in Jmol