STRuster

 STRuster results: 63983

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: D-Alanine ligase N-terminal domain
Protein: D-alanine:D-lactate ligase VanA, N-domain
Species: Enterococcus faecium
Species SCOP sunid: 63983

 Set description
Number of entries: 2
SCOP Entries: d1e4eb1 d1e4ea1
Alignment File: 63983.alig
Aligned Sequences: 63983_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 63983_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(62, 63), (79, 82)]
Uniprot Nr [(64, 65), (81, 84)]

 Invariant Regions
Region1
Alignment Nr[(0, 61), (64, 78), (83, 129)]
Uniprot Nr[(2, 63), (66, 80), (85, 131)]
Superposition63983_superp_1.pdb.gz
Rasmol Script63983_superp_1.rsm
View in Jmol