STRuster

 STRuster results: 63942

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: NAD(P)-binding Rossmann-fold domains
Superfamily: NAD(P)-binding Rossmann-fold domains
Family: LDH N-terminal domain-like
Protein: MJ0490, lactate/malate dehydrogenase
Species: Archaeon Methanococcus jannaschii
Species SCOP sunid: 63942

 Set description
Number of entries: 3
SCOP Entries: d1hyea1 d1hygb1 d1hyga1
Alignment File: 63942.alig
Aligned Sequences: 63942_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 63942_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(54, 58), (83, 89)]
Uniprot Nr [(55, 59), (84, 90)]

 Invariant Regions
Region1
Alignment Nr[(0, 53), (59, 82), (90, 144)]
Uniprot Nr[(1, 54), (60, 83), (91, 145)]
Superposition63942_superp_1.pdb.gz
Rasmol Script63942_superp_1.rsm
View in Jmol