STRuster

 STRuster results: 63922

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Aldolase
Family: Class I DAHP synthetase
Protein: 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)
Species: Aquifex aeolicus
Species SCOP sunid: 63922

 Set description
Number of entries: 32
SCOP Entries: d1jcya_ d1fwna_ d1lrob_ d1fwnb_ d1jcxb_ d1lrqb_ d1pe1b_ d1pcwb_ d1lrnb_ d1fwwb_ d1fwta_ d1jcyb_ d1lrna_ d1fxpa_ d1fwwa_ d1fxqb_ d1fy6b_ d1pcka_ d1jcxa_ d1fwsb_ d1lroa_ d1fx6b_ d1fwsa_ d1fx6a_ d1fxpb_ d1pe1a_ d1fy6a_ d1fxqa_ d1pckb_ d1lrqa_ d1pcwa_ d1fwtb_
Alignment File: 63922.alig
Aligned Sequences: 63922_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 63922_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 0), (188, 193)]
Uniprot Nr [(1, 1), (189, 194)]

 Invariant Regions
Region1
Alignment Nr[(1, 187), (194, 263)]
Uniprot Nr[(2, 188), (195, 264)]
Superposition63922_superp_1.pdb.gz
Rasmol Script63922_superp_1.rsm
View in Jmol