STRuster

 STRuster results: 63710

 SCOP 1.71 classification
Class: All beta proteins
Fold: Ganglioside M2 (gm2) activator
Superfamily: Ganglioside M2 (gm2) activator
Family: Ganglioside M2 (gm2) activator
Protein: Ganglioside M2 (gm2) activator
Species: Human (Homo sapiens)
Species SCOP sunid: 63710

 Set description
Number of entries: 7
SCOP Entries: d1pu5a_ d1tjjb_ d1tjja_ d1pu5b_ d1puba_ d1tjjc_ d1pu5c_
Alignment File: 63710.alig
Aligned Sequences: 63710_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 63710_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(11, 13), (70, 72), (126, 134)]
Uniprot Nr [(40, 42), (99, 101), (155, 163)]

 Invariant Regions
Region1
Alignment Nr[(0, 10), (14, 69), (73, 125), (135, 164)]
Uniprot Nr[(31, 39), (43, 98), (102, 154), (164, 193)]
Superposition63710_superp_1.pdb.gz
Rasmol Script63710_superp_1.rsm
View in Jmol