STRuster

 STRuster results: 63626

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Nuclear receptor ligand-binding domain
Superfamily: Nuclear receptor ligand-binding domain
Family: Nuclear receptor ligand-binding domain
Protein: Ultraspiracle protein, usp
Species: Heliothis virescens
Species SCOP sunid: 63626

 Set description
Number of entries: 3
SCOP Entries: d1g2na_ d1r1ka_ d1r20a_
Alignment File: 63626.alig
Aligned Sequences: 63626_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 63626_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (17, 33), (98, 101), (112, 114), (207, 208)]
Uniprot Nr [(1, 3), (18, 34), (99, 102), (113, 115), (208, 209)]

 Invariant Regions
Region1
Alignment Nr[(3, 16), (34, 97), (102, 111), (115, 206), (209, 255)]
Uniprot Nr[(4, 17), (35, 98), (103, 112), (116, 207), (210, 256)]
Superposition63626_superp_1.pdb.gz
Rasmol Script63626_superp_1.rsm
View in Jmol