STRuster

 STRuster results: 63529

 SCOP 1.71 classification
Class: All alpha proteins
Fold: 4-helical cytokines
Superfamily: 4-helical cytokines
Family: Long-chain cytokines
Protein: Leukemia inhibitory factor (LIF)
Species: Human (Homo sapiens)
Species SCOP sunid: 63529

 Set description
Number of entries: 3
SCOP Entries: d1emra_ d1pvhd_ d1pvhb_
Alignment File: 63529.alig
Aligned Sequences: 63529_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 63529_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 16), (51, 63), (94, 95), (114, 142), (165, 168)]
Uniprot Nr [(34, 50), (85, 97), (128, 129), (148, 176), (199, 202)]

 Invariant Regions
Region1
Alignment Nr[(17, 50), (64, 93), (96, 113), (143, 164)]
Uniprot Nr[(51, 84), (98, 127), (130, 147), (177, 198)]
Superposition63529_superp_1.pdb.gz
Rasmol Script63529_superp_1.rsm
View in Jmol