STRuster

 STRuster results: 57613

 SCOP 1.71 classification
Class: Small proteins
Fold: Thyroglobulin type-1 domain
Superfamily: Thyroglobulin type-1 domain
Family: Thyroglobulin type-1 domain
Protein: Class II MHC associated p41 invariant chain fragment
Species: Human (Homo sapiens)
Species SCOP sunid: 57613

 Set description
Number of entries: 2
SCOP Entries: d1icfi_ d1icfj_
Alignment File: 57613.alig
Aligned Sequences: 57613_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 57613_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 64)]
Uniprot Nr[(210, 274)]
Superposition57613_superp_1.pdb.gz
Rasmol Script57613_superp_1.rsm
View in Jmol