STRuster

 STRuster results: 57533

 SCOP 1.71 classification
Class: Small proteins
Fold: Cystine-knot cytokines
Superfamily: Cystine-knot cytokines
Family: Coagulogen
Protein: Coagulogen
Species: Japanese horseshoe crab (Tachypleus tridentatus)
Species SCOP sunid: 57533

 Set description
Number of entries: 2
SCOP Entries: d1aocb_ d1aoca_
Alignment File: 57533.alig
Aligned Sequences: 57533_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 57533_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 21), (39, 61), (128, 129), (173, 174)]
Uniprot Nr [(21, 42), (60, 82), (149, 150), (194, 195)]

 Invariant Regions
Region1
Alignment Nr[(22, 38), (62, 127), (130, 172)]
Uniprot Nr[(43, 59), (83, 148), (151, 193)]
Superposition57533_superp_1.pdb.gz
Rasmol Script57533_superp_1.rsm
View in Jmol