| STRuster results: 57519 |
| SCOP 1.71 classification |
| Class: | Small proteins |
| Fold: | Cystine-knot cytokines |
| Superfamily: | Cystine-knot cytokines |
| Family: | Transforming growth factor (TGF)-beta |
| Protein: | Glial cell-derived neurotrophic factor, GDNF |
| Species: | Rat (Rattus norvegicus) |
| Species SCOP sunid: | 57519 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1agqb_ d1agqc_ d1agqd_ d1agqa_ |
| Alignment File: | 57519.alig |
| Aligned Sequences: | 57519_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 57519_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(41, 57), (80, 81)] |
| Uniprot Nr | [(155, 171), (194, 195)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 40), (58, 79), (82, 97)] |
| Uniprot Nr | [(114, 154), (172, 193), (196, 211)] |
| Superposition | 57519_superp_1.pdb.gz |
| Rasmol Script | 57519_superp_1.rsm |
| View in Jmol | |
