STRuster

 STRuster results: 56950

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Transmembrane beta-barrels
Superfamily: Porins
Family: Ligand-gated protein channel
Protein: Ferric hydroxamate uptake receptor FhuA
Species: Escherichia coli
Species SCOP sunid: 56950

 Set description
Number of entries: 9
SCOP Entries: d1qffa_ d2fcpa_ d1qkca_ d1qjqa_ d1fi1a_ d1fcpa_ d1by5a_ d1by3a_ d1qfga_
Alignment File: 56950.alig
Aligned Sequences: 56950_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56950_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 11), (42, 44), (61, 63), (130, 131), (368, 371), (392, 394), (414, 415), (564, 565), (586, 589)]
Uniprot Nr [(51, 62), (92, 94), (111, 113), (178, 179), (413, 415), (436, 438), (438, 439), (587, 588), (609, 612)]

 Invariant Regions
Region1
Alignment Nr[(12, 41), (45, 60), (64, 129), (132, 367), (372, 391), (416, 563), (566, 585), (590, 726)]
Uniprot Nr[(63, 91), (95, 110), (114, 177), (180, 413), (416, 435), (440, 586), (589, 608), (613, 747)]
Superposition56950_superp_1.pdb.gz
Rasmol Script56950_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(395, 413)]
Uniprot Nr[(438, 438)]
Superposition-