STRuster

 STRuster results: 56877

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Family A G protein-coupled receptor-like
Superfamily: Family A G protein-coupled receptor-like
Family: Rhodopsin-like
Protein: Rhodopsin
Species: Cow (Bos taurus)
Species SCOP sunid: 56877

 Set description
Number of entries: 10
SCOP Entries: d1l9hb_ d1u19a_ d1l9ha_ d1f88a_ d1hzxb_ d1f88b_ d1u19b_ d1gzmb_ d1hzxa_ d1gzma_
Alignment File: 56877.alig
Aligned Sequences: 56877_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56877_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(139, 145), (227, 243), (323, 347)]
Uniprot Nr [(140, 146), (228, 244), (324, 348)]

 Invariant Regions
Region1
Alignment Nr[(0, 138), (146, 226), (244, 322)]
Uniprot Nr[(1, 139), (147, 227), (245, 323)]
Superposition56877_superp_1.pdb.gz
Rasmol Script56877_superp_1.rsm
View in Jmol