STRuster

 STRuster results: 56799

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: Dehydroquinate synthase-like
Superfamily: Dehydroquinate synthase-like
Family: Dehydroquinate synthase, DHQS
Protein: Dehydroquinate synthase, DHQS
Species: Aspergillus nidulans
Species SCOP sunid: 56799

 Set description
Number of entries: 23
SCOP Entries: d1nvda_ d1nr5a_ d1nuab_ d1nvdb_ d1sg6a_ d1nuaa_ d1nvbb_ d1nvfc_ d1nvec_ d1nved_ d1nvfa_ d1nr5b_ d1dqsb_ d1nvaa_ d1nrxb_ d1nvea_ d1nvab_ d1nrxa_ d1nvba_ d1nveb_ d1nvfb_ d1sg6b_ d1dqsa_
Alignment File: 56799.alig
Aligned Sequences: 56799_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56799_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 0), (61, 62), (76, 79), (219, 226), (253, 259), (334, 337), (350, 359), (388, 390)]
Uniprot Nr [(3, 3), (64, 65), (79, 82), (222, 229), (256, 262), (337, 340), (353, 362), (391, 393)]

 Invariant Regions
Region1
Alignment Nr[(227, 252), (260, 333), (338, 349), (360, 387)]
Uniprot Nr[(230, 255), (263, 336), (341, 352), (363, 390)]
Superposition56799_superp_1.pdb.gz
Rasmol Script56799_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(1, 60), (63, 75), (80, 218)]
Uniprot Nr[(4, 63), (66, 78), (83, 221)]
Superposition56799_superp_2.pdb.gz
Rasmol Script56799_superp_2.rsm
View in Jmol
 
Region3
Alignment Nr[(1, 60), (260, 333)]
Uniprot Nr[(4, 63), (263, 336)]
Superposition56799_superp_3.pdb.gz
Rasmol Script56799_superp_3.rsm
View in Jmol
 
Region4
Alignment Nr[(80, 218), (227, 252)]
Uniprot Nr[(83, 221), (230, 255)]
Superposition-