STRuster

 STRuster results: 56755

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
Superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
Family: D-aminoacid aminotransferase-like PLP-dependent enzymes
Protein: D-aminoacid aminotransferase
Species: Bacillus sp., strain YM-1
Species SCOP sunid: 56755

 Set description
Number of entries: 14
SCOP Entries: d1a0gb_ d4daaa_ d5daab_ d2daab_ d4daab_ d3daab_ d3daaa_ d2dabb_ d2daaa_ d2daba_ d1a0ga_ d1daab_ d1daaa_ d5daaa_
Alignment File: 56755.alig
Aligned Sequences: 56755_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56755_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(102, 105), (277, 281)]
Uniprot Nr [(103, 106), (278, 282)]

 Invariant Regions
Region1
Alignment Nr[(0, 101), (106, 276)]
Uniprot Nr[(1, 102), (107, 277)]
Superposition56755_superp_1.pdb.gz
Rasmol Script56755_superp_1.rsm
View in Jmol