STRuster

 STRuster results: 56729

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: DNA topoisomerase IV, alpha subunit
Superfamily: DNA topoisomerase IV, alpha subunit
Family: DNA topoisomerase IV, alpha subunit
Protein: DNA topoisomerase IV, alpha subunit
Species: Archaeon Methanococcus jannaschii
Species SCOP sunid: 56729

 Set description
Number of entries: 2
SCOP Entries: d1d3ya_ d1d3yb_
Alignment File: 56729.alig
Aligned Sequences: 56729_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 56729_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(88, 89)]
Uniprot Nr [(159, 160)]

 Invariant Regions
Region1
Alignment Nr[(0, 87), (90, 298)]
Uniprot Nr[(71, 158), (161, 369)]
Superposition56729_superp_1.pdb.gz
Rasmol Script56729_superp_1.rsm
View in Jmol