| STRuster results: 56696 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | DNA/RNA polymerases |
| Superfamily: | DNA/RNA polymerases |
| Family: | RNA-dependent RNA-polymerase |
| Protein: | Viral RNA polymerase |
| Species: | Poliovirus type 1, strain Mahoney |
| Species SCOP sunid: | 56696 |
| Set description |
| Number of entries: | 5 |
| SCOP Entries: | d1ra6a_ d1raja_ d1tqla_ d1rdr__ d1ra7a_ |
| Alignment File: | 56696.alig |
| Aligned Sequences: | 56696_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 56696_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(22, 24), (61, 62), (95, 96), (176, 190), (265, 266), (400, 404)] |
| Uniprot Nr | [(1770, 1772), (1809, 1810), (1843, 1844), (1924, 1938), (2013, 2014), (2148, 2152)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(25, 60), (63, 94), (97, 175), (191, 264), (267, 399), (405, 460)] |
| Uniprot Nr | [(1773, 1808), (1811, 1842), (1845, 1923), (1939, 2012), (2015, 2147), (2153, 2208)] |
| Superposition | 56696_superp_1.pdb.gz |
| Rasmol Script | 56696_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(0, 21), (25, 60), (97, 175)] |
| Uniprot Nr | [(1748, 1769), (1773, 1808), (1845, 1923)] |
| Superposition | 56696_superp_2.pdb.gz |
| Rasmol Script | 56696_superp_2.rsm |
| View in Jmol | |
