| STRuster results: 56679 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | DNA/RNA polymerases |
| Superfamily: | DNA/RNA polymerases |
| Family: | DNA polymerase I |
| Protein: | T7 phage DNA polymerase |
| Species: | Bacteriophage T7 |
| Species SCOP sunid: | 56679 |
| Set description |
| Number of entries: | 15 |
| SCOP Entries: | d1tk0a2 d1x9sa2 d1t7pa2 d1sl0c2 d1sl0a2 d1sl1a2 d1sl2a2 d1skwa2 d1x9ma2 d1tk8a2 d1t8ea2 d1tk5a2 d1tkda2 d1sksa2 d1x9wa2 |
| Alignment File: | 56679.alig |
| Aligned Sequences: | 56679_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 56679_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(83, 99), (290, 299), (311, 349), (363, 376)] |
| Uniprot Nr | [(294, 310), (501, 510), (522, 560), (574, 587)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 82), (100, 289), (350, 362), (377, 493)] |
| Uniprot Nr | [(211, 293), (311, 500), (561, 573), (588, 704)] |
| Superposition | 56679_superp_1.pdb.gz |
| Rasmol Script | 56679_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(300, 310)] |
| Uniprot Nr | [(511, 521)] |
| Superposition | 56679_superp_2.pdb.gz |
| Rasmol Script | 56679_superp_2.rsm |
| View in Jmol | |
