STRuster

 STRuster results: 56354

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: DNA breaking-rejoining enzymes
Superfamily: DNA breaking-rejoining enzymes
Family: Lambda integrase-like, catalytic core
Protein: Integrase (Int)
Species: Bacteriophage lambda
Species SCOP sunid: 56354

 Set description
Number of entries: 4
SCOP Entries: d1p7db_ d1ae9a_ d1ae9b_ d1p7da_
Alignment File: 56354.alig
Aligned Sequences: 56354_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56354_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(259, 260), (276, 283)]
Uniprot Nr [(333, 334), (349, 356)]

 Invariant Regions
Region1
Alignment Nr[(0, 258)]
Uniprot Nr[(74, 332)]
Superposition56354_superp_1.pdb.gz
Rasmol Script56354_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(261, 275)]
Uniprot Nr[(335, 348)]
Superposition-