STRuster

 STRuster results: 56352

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: DNA breaking-rejoining enzymes
Superfamily: DNA breaking-rejoining enzymes
Family: Lambda integrase-like, catalytic core
Protein: Integrase
Species: Bacteriophage HP1
Species SCOP sunid: 56352

 Set description
Number of entries: 4
SCOP Entries: d1aihb_ d1aihc_ d1aihd_ d1aiha_
Alignment File: 56352.alig
Aligned Sequences: 56352_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56352_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(18, 19), (59, 64), (159, 169)]
Uniprot Nr [(186, 187), (227, 232), (327, 337)]

 Invariant Regions
Region1
Alignment Nr[(0, 17), (20, 58), (65, 158)]
Uniprot Nr[(168, 185), (188, 226), (233, 326)]
Superposition56352_superp_1.pdb.gz
Rasmol Script56352_superp_1.rsm
View in Jmol