STRuster

 STRuster results: 56335

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: LDH C-terminal domain-like
Superfamily: LDH C-terminal domain-like
Family: Lactate & malate dehydrogenases, C-terminal domain
Protein: Malate dehydrogenase
Species: Archaeon Haloarcula marismortui
Species SCOP sunid: 56335

 Set description
Number of entries: 12
SCOP Entries: d1d3aa2 d1o6zd2 d1gt2b2 d1o6za2 d1hlpb2 d1o6zc2 d2hlpa2 d1hlpa2 d1o6zb2 d2hlpb2 d1d3ab2 d1gt2a2
Alignment File: 56335.alig
Aligned Sequences: 56335_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56335_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(51, 68), (159, 160)]
Uniprot Nr [(195, 212), (303, 304)]

 Invariant Regions
Region1
Alignment Nr[(0, 50), (69, 158)]
Uniprot Nr[(144, 194), (213, 302)]
Superposition56335_superp_1.pdb.gz
Rasmol Script56335_superp_1.rsm
View in Jmol