STRuster

 STRuster results: 56274

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Pyruvoyl-dependent histidine and arginine decarboxylases
Superfamily: Pyruvoyl-dependent histidine and arginine decarboxylases
Family: Histidine decarboxylase
Protein: Histidine decarboxylase
Species: Lactobacillus sp., strain 30a
Species SCOP sunid: 56274

 Set description
Number of entries: 11
SCOP Entries: d1ibu.3 d1ibu.1 d1ibu.2 d1hq6.1 d1ibt.1 d1ibt.3 d1ibt.2 d1ibv.3 d1ibv.2 d1ibv.1 d1hq6.2
Alignment File: 56274.alig
Aligned Sequences: 56274_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56274_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(44, 51), (109, 112), (157, 170), (204, 208), (225, 230), (247, 250), (302, 309)]
Uniprot Nr [(45, 52), (110, 113), (158, 171), (205, 209), (226, 231), (248, 251), (303, 310)]

 Invariant Regions
Region1
Alignment Nr[(0, 43), (52, 108), (113, 156), (171, 203), (209, 224), (231, 246), (251, 301)]
Uniprot Nr[(1, 44), (53, 109), (114, 157), (172, 204), (210, 225), (232, 247), (252, 302)]
Superposition56274_superp_1.pdb.gz
Rasmol Script56274_superp_1.rsm
View in Jmol