STRuster

 STRuster results: 56246

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ntn hydrolase-like
Superfamily: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family: Penicillin acylase, catalytic domain
Protein: Penicillin acylase
Species: Escherichia coli
Species SCOP sunid: 56246

 Set description
Number of entries: 21
SCOP Entries: d1ai4.1 d1gm9.1 d1fxv.1 d1ajq.1 d1k5s.1 d1gkf.1 d1k5q.1 d1gk9.1 d1jx9.1 d1ai5.1 d1k7d.1 d1h2g.1 d1e3a.1 d1pnk.1 d1ajn.1 d1gm7.1 d1ai6.1 d1kec.1 d1ajp.1 d1gm8.1 d1ai7.1
Alignment File: 56246.alig
Aligned Sequences: 56246_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56246_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(199, 207), (388, 394)]
Uniprot Nr [(227, 235), (416, 422)]

 Invariant Regions
Region1
Alignment Nr[(0, 198), (208, 387), (395, 818)]
Uniprot Nr[(28, 226), (236, 415), (423, 846)]
Superposition56246_superp_1.pdb.gz
Rasmol Script56246_superp_1.rsm
View in Jmol