STRuster

 STRuster results: 56179

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: FAD-binding domain
Superfamily: FAD-binding domain
Family: FAD-linked oxidases, N-terminal domain
Protein: Vanillyl-alcohol oxidase
Species: Fungus (Penicillium simplicissimum)
Species SCOP sunid: 56179

 Set description
Number of entries: 28
SCOP Entries: d1w1la2 d1w1ja2 d1e8fa2 d1e0yb2 d1e8ha2 d1w1kb2 d1qltb2 d1ahvb2 d1e8hb2 d2vaoa2 d1w1ma2 d1ahub2 d1e8ga2 d1w1jb2 d1ahua2 d1w1ka2 d1vaoa2 d1ahva2 d1qlub2 d1qlta2 d1e8fb2 d1qlua2 d2vaob2 d1e0ya2 d1e8gb2 d1w1lb2 d1vaob2 d1w1mb2
Alignment File: 56179.alig
Aligned Sequences: 56179_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56179_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (40, 46), (59, 61)]
Uniprot Nr [(6, 7), (46, 52), (65, 67)]

 Invariant Regions
Region1
Alignment Nr[(47, 58), (62, 267)]
Uniprot Nr[(53, 64), (68, 273)]
Superposition56179_superp_1.pdb.gz
Rasmol Script56179_superp_1.rsm
View in Jmol