STRuster

 STRuster results: 56145

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Protein kinase-like (PK-like)
Superfamily: Protein kinase-like (PK-like)
Family: Protein kinases, catalytic subunit
Protein: Type I TGF-beta receptor R4
Species: Human (Homo sapiens)
Species SCOP sunid: 56145

 Set description
Number of entries: 11
SCOP Entries: d1py5a_ d1b6ch_ d1iase_ d1b6cd_ d1vjya_ d1iasc_ d1b6cf_ d1iasa_ d1iasb_ d1iasd_ d1b6cb_
Alignment File: 56145.alig
Aligned Sequences: 56145_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56145_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 23), (40, 45), (62, 66), (79, 82), (96, 103), (150, 153), (195, 202), (288, 289), (328, 332)]
Uniprot Nr [(171, 194), (211, 216), (233, 237), (250, 253), (267, 274), (321, 324), (366, 373), (459, 460), (499, 503)]

 Invariant Regions
Region1
Alignment Nr[(24, 39), (46, 61), (67, 78), (83, 95), (104, 149), (154, 194), (290, 327)]
Uniprot Nr[(195, 210), (217, 232), (238, 249), (254, 266), (275, 320), (325, 365), (461, 498)]
Superposition56145_superp_1.pdb.gz
Rasmol Script56145_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(24, 39), (46, 61), (83, 95), (104, 149), (154, 194), (203, 287), (290, 327)]
Uniprot Nr[(195, 210), (217, 232), (254, 266), (275, 320), (325, 365), (374, 458), (461, 498)]
Superposition56145_superp_2.pdb.gz
Rasmol Script56145_superp_2.rsm
View in Jmol