STRuster

 STRuster results: 56022

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: The spindle assembly checkpoint protein mad2
Superfamily: The spindle assembly checkpoint protein mad2
Family: The spindle assembly checkpoint protein mad2
Protein: The spindle assembly checkpoint protein mad2
Species: Human (Homo sapiens)
Species SCOP sunid: 56022

 Set description
Number of entries: 4
SCOP Entries: d1go4d_ d1go4b_ d1go4c_ d1go4a_
Alignment File: 56022.alig
Aligned Sequences: 56022_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 56022_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(130, 131), (167, 168), (192, 196)]
Uniprot Nr [(138, 139), (175, 176), (200, 204)]

 Invariant Regions
Region1
Alignment Nr[(0, 129), (132, 166), (169, 191)]
Uniprot Nr[(8, 137), (140, 174), (177, 199)]
Superposition56022_superp_1.pdb.gz
Rasmol Script56022_superp_1.rsm
View in Jmol