STRuster

 STRuster results: 55699

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Class II aaRS and biotin synthetases
Superfamily: Class II aaRS and biotin synthetases
Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Protein: Aspartyl-tRNA synthetase (AspRS)
Species: Escherichia coli
Species SCOP sunid: 55699

 Set description
Number of entries: 6
SCOP Entries: d1il2b3 d1il2a3 d1c0aa3 d1eqrb3 d1eqra3 d1eqrc3
Alignment File: 55699.alig
Aligned Sequences: 55699_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 55699_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 9), (59, 67), (111, 119), (329, 335), (402, 403), (477, 483)]
Uniprot Nr [(107, 116), (166, 174), (218, 226), (436, 442), (509, 510), (584, 590)]

 Invariant Regions
Region1
Alignment Nr[(10, 58), (68, 110), (120, 328), (404, 476)]
Uniprot Nr[(117, 165), (175, 217), (227, 435), (511, 583)]
Superposition55699_superp_1.pdb.gz
Rasmol Script55699_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(10, 58), (120, 328), (336, 401)]
Uniprot Nr[(117, 165), (227, 435), (443, 508)]
Superposition55699_superp_2.pdb.gz
Rasmol Script55699_superp_2.rsm
View in Jmol