STRuster

 STRuster results: 55687

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Class II aaRS and biotin synthetases
Superfamily: Class II aaRS and biotin synthetases
Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Protein: Lysyl-tRNA synthetase (LysRS)
Species: Escherichia coli, gene lysS
Species SCOP sunid: 55687

 Set description
Number of entries: 2
SCOP Entries: d1bbua2 d1bbwa2
Alignment File: 55687.alig
Aligned Sequences: 55687_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 55687_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(63, 65), (109, 115), (203, 204), (239, 246), (287, 289)]
Uniprot Nr [(217, 219), (263, 269), (357, 358), (393, 400), (441, 443)]

 Invariant Regions
Region1
Alignment Nr[(0, 62), (66, 108), (116, 202), (247, 286), (290, 348)]
Uniprot Nr[(154, 216), (220, 262), (270, 356), (401, 440), (444, 502)]
Superposition55687_superp_1.pdb.gz
Rasmol Script55687_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(116, 202), (205, 238)]
Uniprot Nr[(270, 356), (359, 392)]
Superposition55687_superp_2.pdb.gz
Rasmol Script55687_superp_2.rsm
View in Jmol