STRuster

 STRuster results: 55357

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family: GAPDH-like
Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Species: Leishmania mexicana
Species SCOP sunid: 55357

 Set description
Number of entries: 16
SCOP Entries: d1a7kc2 d1i32c2 d1i32f2 d1i33e2 d1a7kd2 d1i33b2 d1a7kb2 d1i32a2 d1i32d2 d1i33d2 d1i33c2 d1i32b2 d1i33a2 d1a7ka2 d1i32e2 d1i33f2
Alignment File: 55357.alig
Aligned Sequences: 55357_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 55357_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(60, 64), (155, 156)]
Uniprot Nr [(226, 230), (321, 322)]

 Invariant Regions
Region1
Alignment Nr[(0, 59), (65, 154), (157, 168)]
Uniprot Nr[(166, 225), (231, 320), (323, 334)]
Superposition55357_superp_1.pdb.gz
Rasmol Script55357_superp_1.rsm
View in Jmol