STRuster

 STRuster results: 55293

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: RPB5-like RNA polymerase subunit
Superfamily: RPB5-like RNA polymerase subunit
Family: RPB5
Protein: Eukaryotic RPB5 C-terminal domain
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 55293

 Set description
Number of entries: 5
SCOP Entries: d1i3qe2 d1dzfa2 d1i6he2 d1i50e2 d1k83e2
Alignment File: 55293.alig
Aligned Sequences: 55293_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 55293_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(56, 71)]
Uniprot Nr [(200, 215)]

 Invariant Regions
Region1
Alignment Nr[(0, 55)]
Uniprot Nr[(144, 199)]
Superposition55293_superp_1.pdb.gz
Rasmol Script55293_superp_1.rsm
View in Jmol