STRuster

 STRuster results: 55086

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Family: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Protein: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Species: Escherichia coli
Species SCOP sunid: 55086

 Set description
Number of entries: 18
SCOP Entries: d1eqma_ d1im6a_ d1dy3a_ d1f9ha_ d1rb0a_ d1hka__ d1rtza_ d1q0na_ d1f9ya_ d1g4ca_ d1ru2a_ d1ru1b_ d1hq2a_ d1ru1a_ d1kbra_ d1raoa_ d1g4cb_ d1ex8a_
Alignment File: 55086.alig
Aligned Sequences: 55086_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 55086_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 11), (42, 49), (79, 92), (152, 157)]
Uniprot Nr [(1, 12), (43, 50), (80, 93), (153, 158)]

 Invariant Regions
Region1
Alignment Nr[(12, 41), (50, 78), (93, 151)]
Uniprot Nr[(13, 42), (51, 79), (94, 152)]
Superposition55086_superp_1.pdb.gz
Rasmol Script55086_superp_1.rsm
View in Jmol