STRuster

 STRuster results: 55055

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: CheY-binding domain of CheA
Family: CheY-binding domain of CheA
Protein: CheY-binding domain of CheA
Species: Escherichia coli
Species SCOP sunid: 55055

 Set description
Number of entries: 10
SCOP Entries: d1ffwd_ d1a0od_ d1a0ob_ d1eayd_ d1a0oh_ d1ffsd_ d1ffsb_ d1ffwb_ d1eayc_ d1a0of_
Alignment File: 55055.alig
Aligned Sequences: 55055_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 55055_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 13), (29, 29), (40, 47), (60, 70)]
Uniprot Nr [(158, 171), (187, 187), (198, 205), (218, 228)]

 Invariant Regions
Region1
Alignment Nr[(14, 28), (30, 39)]
Uniprot Nr[(172, 186), (188, 197)]
Superposition55055_superp_1.pdb.gz
Rasmol Script55055_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(30, 39), (48, 59)]
Uniprot Nr[(188, 197), (206, 217)]
Superposition55055_superp_2.pdb.gz
Rasmol Script55055_superp_2.rsm
View in Jmol