STRuster

 STRuster results: 55006

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
Family: Poly(A) polymerase, PAP, C-terminal domain
Protein: Poly(A) polymerase, PAP, C-terminal domain
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 55006

 Set description
Number of entries: 2
SCOP Entries: d1fa0b1 d1fa0a1
Alignment File: 55006.alig
Aligned Sequences: 55006_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 55006_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(65, 73), (87, 88), (125, 127), (142, 144), (169, 178)]
Uniprot Nr [(417, 425), (439, 440), (477, 479), (494, 496), (521, 530)]

 Invariant Regions
Region1
Alignment Nr[(0, 64), (74, 86), (89, 124), (128, 141), (145, 168)]
Uniprot Nr[(352, 416), (426, 438), (441, 476), (480, 493), (497, 520)]
Superposition55006_superp_1.pdb.gz
Rasmol Script55006_superp_1.rsm
View in Jmol