STRuster

 STRuster results: 54970

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: RuBisCO, large subunit, small (N-terminal) domain
Family: Ribulose 1,5-bisphosphate carboxylase-oxygenase
Protein: Ribulose 1,5-bisphosphate carboxylase-oxygenase
Species: Spinach (Spinacia oleracea)
Species SCOP sunid: 54970

 Set description
Number of entries: 37
SCOP Entries: d1rcob2 d8ruca2 d1rcok2 d1rcxr2 d1rxoe2 d1aa1l2 d1rcxb2 d1ausl2 d1rcxe2 d1rboh2 d1rcov2 d8rucg2 d1rboe2 d1rcxl2 d1rcoh2 d1rxol2 d1rbob2 d1rbol2 d8ruce2 d1rcoo2 d1rcxv2 d1aa1b2 d1ir1d2 d1aa1h2 d1ir1c2 d1rcor2 d1rxob2 d1rcol2 d8rucc2 d1rcoe2 d1aa1e2 d1rcxk2 d1rxoh2 d1ir1a2 d1rcxh2 d1ir1b2 d1rcxo2
Alignment File: 54970.alig
Aligned Sequences: 54970_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54970_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 5)]
Uniprot Nr [(9, 14)]

 Invariant Regions
Region1
Alignment Nr[(6, 138)]
Uniprot Nr[(15, 147)]
Superposition54970_superp_1.pdb.gz
Rasmol Script54970_superp_1.rsm
View in Jmol