STRuster

 STRuster results: 54931

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: RNA-binding domain, RBD
Family: Canonical RBD
Protein: Nuclear ribonucleoprotein A1 (RNP A1, UP1)
Species: Human (Homo sapiens)
Species SCOP sunid: 54931

 Set description
Number of entries: 20
SCOP Entries: d1u1qa_ d2up1a1 d1u1la_ d2up1a2 d1u1ka_ d1u1oa_ d1ha1_1 d1up1_2 d1ha1_2 d1pgza1 d1pgza2 d1po6a1 d1u1ma_ d1l3ka1 d1l3ka2 d1u1pa_ d1u1na_ d1up1_1 d1po6a2 d1u1ra_
Alignment File: 54931.alig
Aligned Sequences: 54931_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54931_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(84, 93)]
Uniprot Nr [(90, 99)]

 Invariant Regions
Region1
Alignment Nr[(0, 83), (94, 183)]
Uniprot Nr[(6, 89), (100, 189)]
Superposition54931_superp_1.pdb.gz
Rasmol Script54931_superp_1.rsm
View in Jmol